From 615cd66a873853f335177ec8b307c35be17d4b36 Mon Sep 17 00:00:00 2001 From: Simeon Simeonov Date: Wed, 21 Sep 2022 15:38:37 +0200 Subject: Add notebooks/python/python_oo.ipynb and update notebooks/sqlalchemy/sqlalchemy.ipynb --- reveal.js/sqlalchemy.html | 820 ++++++++++++++++++++++++++-------------------- 1 file changed, 461 insertions(+), 359 deletions(-) (limited to 'reveal.js/sqlalchemy.html') diff --git a/reveal.js/sqlalchemy.html b/reveal.js/sqlalchemy.html index 96f83e7..a0d6617 100755 --- a/reveal.js/sqlalchemy.html +++ b/reveal.js/sqlalchemy.html @@ -1,375 +1,477 @@ - - - SQLAlchemy - - - - - - - - - - - - - - - -
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SQLAlchemy

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Data Science @ Statnett

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+ + +
+ +
+

SQLAlchemy

+

Data Engineering @ Statnett


-

Simeon Simeonov

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+

Simeon Simeonov

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Agenda

+
+

Agenda


    -
  • SQLAlchemy - Design & overview
  • -
  • SQLAlchemy - A small practical example
  • -
  • Q & A
  • +
  • SQLAlchemy - Design & overview
  • +
  • SQLAlchemy - A small practical example
  • +
  • Q & A
-
+
-
+
-
-

What is SQLAlchemy?

+
+

What is SQLAlchemy?


-

SQLAlchemy is a Python library created by Mike Bayer to provide a high-level Pythonic interface to RDBMS such as PostgreSQL, SQLite, MySQL, Oracle, DB2.

-

SQLAlchemy includes RDBMS-independent SQL expression language and an object-relational mapper (ORM).

-
+

SQLAlchemy is a Python library created by Mike Bayer to provide a high-level Pythonic interface to RDBMS such as PostgreSQL, SQLite, MySQL, Oracle, DB2.

+

SQLAlchemy includes RDBMS-independent SQL expression language and an object-relational mapper (ORM).

+
-
-

Why use SQLAlchemy?

+
+

Why use SQLAlchemy?


    -
  • free software - free as in "freedom" (MIT licensed)

  • -
  • portability - the programming interface is independent of the type of RDBMS and connector used

  • -
  • security - no more SQL injections

  • -
  • abstraction - no need to bother with complex JOINs

  • -
  • object-orientation - you work with objects instead of tables and rows

  • -
  • performance - exploits the likehood of reusing a particular query

  • -
  • flexibility - you can override almost anything

  • +
  • free software - free as in "freedom" (MIT licensed)

  • +
  • portability - the programming interface is independent of the type of RDBMS and connector used

  • +
  • security - no more SQL injections

  • +
  • abstraction - no need to bother with complex JOINs

  • +
  • object-orientation - you work with objects instead of tables and rows

  • +
  • performance - exploits the likehood of reusing a particular query

  • +
  • flexibility - you can override almost anything

-
- -
-

Basic architecture

-

SQLAlchemy consists of several components, including the ORM.

-
    -
  • Engine- manages the connection pool and the RDBMS-independent SQL dialect layer
  • -
  • MetaData - used to collect and organize information about your table layout (schema)
  • -
  • SQL expression language - provides an API to execute your queries and updates against your tables, all from Python, and all in a database-independent way (low-level interface)
  • -
  • ORM - provides a convenient way to add database persistence to your Python objects without requiring you to design your objects around the database, or the database around the objects (high-level interface)
  • -
  • Session - establishes all conversations with the RDBMS and represents a "holding zone" for all the objects which you've loaded or associated with it during its lifespan
  • -
- -
- -
-

Example

-

SQLAlchemy gives us the choice between classical mapping and the newer declarative mapping

-
-            
-              import sqlalchemy
-              sqlalchemy.__version__
-              # Out: '1.3.23'
-
-              from sqlalchemy import create_engine
-
-              # engine = create_engine("postgresql+psycopg2://user:zipassword@localhost/mydb" , echo=True)
-              # The string form of the URL is dialect+driver://user:password@host/dbname[?key=value..],
-              # where dialect is a database name such as mysql, oracle, postgresql, etc.,
-              # and driver the name of a DBAPI, such as psycopg2, pyodbc, cx_oracle
-              # The echo flag is a shortcut to setting up SQLAlchemy logging,
-              # which is accomplished via Python’s standard logging module.
-              # engine = create_engine("sqlite:///library.db", echo=True)
-              engine = create_engine("sqlite:///:memory:", echo=True)
-
-              from sqlalchemy import Column, ForeignKey, Integer, String, Table
-
-              metadata = MetaData()
-
-              authors_table = Table(
-                  "authors",
-                  metadata,
-                  Column("author_id", Integer, primary_key=True),
-                  Column("name", String),
-              )  # Column("name", String(50)) is possible
-
-              books_table = Table(
-                  "books",
-                  metadata,
-                  Column("book_id", Integer, primary_key=True),
-                  Column("title", String),
-                  Column("description", String),
-                  Column("author_id", ForeignKey('authors.author_id')),
-              )
-
-              metadata.create_all(engine)  # creates the tables
-            
-          
-
- -
-

Example (cont...)

-

Use of SQL expression language

-
-            
-              insert_stmt = authors_table.insert(bind=engine)
-              type(insert_stmt)
-              # Out: <class 'sqlalchemy.sql.expression.Insert'>
-              print(insert_stmt)
-              # Out: INSERT INTO authors (id, name) VALUES (:id,:name)
-
-              compiled_stmt = insert_stmt.compile()
-              print(compiled_stmt.params)
-              # Out: {'id': None, 'name': None}
-
-              insert_stmt.execute(name="Alexandre Dumas")  # insert a single entry
-              insert_stmt.execute([{"name": "Mr X"}, {"name": "Mr Y"}])  # a list of entries
-
-              metadata.bind = engine  # no need to explicitly bind the engine from now on
-              select_stmt = authors_table.select(authors_table.c.id==2)
-              result = select_stmt.execute()
-              result.fetchall()
-              # Out: [(1, 'Mr X')]
-
-              del_stmt = authors_table.delete()
-              del_stmt.execute(whereclause=text("name='Mr Y'"))
-              del_stmt.execute()  # delete all
-            
-          
-
- -
-

Example (cont...)

-

Use of classical mapping

-
-            
-              from sqlalchemy.orm import backref, mapper, relation
-
-              class Author:
-                  def __init__(self, name):
-                      self.name = name
-
-                  def __str__(self):
-                      return self.name
-
-
-              class Book:
-                  def __init__(self, title, description, author):
-                      self.title = title
-                      self.description = description
-                      self.author = author
-
-                  def __str__(self):
-                      return self.title
-
-              mapper(Book, books_table)
-              mapper(Author, authors_table, properties = {"books": relation(Book, backref="author")})
-            
-          
-
- -
-

Example (cont...)

-

Doing the same thing the easy way with declarative mapping

-
-            
-              from sqlalchemy.ext.declarative import declarative_base
-              from sqlalchemy.orm import relationship, backref
-
-              Base = declarative_base()
-
-              class Author(Base):
-                  __tablename__ = "authors"
-
-                  author_id = Column(Integer, primary_key=True)
-                  name = Column(String)
-
-                  def __init__(self, name):
-                      self.name = name
-
-                  def __str__(self):
-                      return self.name
-
-
-              class Book(Base):
-                  __tablename__ = "books"  # self.__table__ will be available for our objects
-
-                  book_id = Column(Integer, primary_key=True)
-                  title = Column(String)
-                  description = Column(String)
-                  author_id = Column(Integer, ForeignKey("authors.author_id"))
-                  author = relationship(Author, backref=backref("books", order_by=title))
-
-                  def __init__(self, title, description, author):
-                      self.title = title
-                      self.description = description
-                      self.author = author
-
-                  def __str__(self):
-                      return self.title
-
-              Base.metadata.create_all(engine)  # create tables
-            
-          
-
- -
-

Example (cont...)

-

Creating instances

-
-            
-              from sqlalchemy.orm import sessionmaker
-
-              Session = sessionmaker(bind=engine)  # bound session
-              session = Session()
-
-              author_1 = Author("Richard Dawkins")
-              author_2 = Author("Matt Ridley")
-
-              book_1 = Book("The Red Queen", "A popular science book", author_2)
-              book_2 = Book("The Selfish Gene", "A popular science book", author_1)
-              book_3 = Book("The Blind Watchmaker", "The theory of evolutio", author_1)  # typo
-
-              session.add(author_1)
-              session.add(author_2)
-              session.add(book_1)
-              session.add(book_2)
-              session.add(book_3)
-              # or simply session.add_all([author_1, author_2, book_1, book_2, book_3])
-
-              # session.flush()
-              session.commit()  # flushes (issues the statements and sends them to the RDBMS) and commits
-
-              book_3.description = "The theory of evolution"  # update the object
-              book_3 in session   # check whether the object is in the session
-              # Out: True
-
-              session.commit()
-            
-          
-
- -
-

Example (cont...)

-

Queries

-
-            
-              session.query(Book).order_by(Book.book_id)  # returns a Query instance with a .statement attribute
-              session.query(Book).order_by(Book.book_id).all()  # returns an object-list
-
-              # return all book objects where title == "The Selfish Gene"
-              session.query(Book).filter(Book.title == "The Selfish Gene").order_by(Book.book_id).all()
-
-              # using LIKE
-              session.query(Book).filter(Book.title.like("The%")).order_by(Book.book_id).all()
-
-              query = session.query(Book).filter(Book.book_id == 9).order_by(Book.book_id)
-              query.count()  # returns 0
-              query.all()  # returns an empty list
-              query.first()  # returns None
-              query.one()  # raises NoResultFound exception
-
-              query = session.query(Book).filter(Book.book_id == 1).order_by(Book.book_id)
-              book_1 = query.one()
-              book_1.description  # returns "A popular science book"
-              book_1.author.books  # returns a list of Book-objects representing all the books from the same author.
-
-              # get a list of all Book-instances where the author"s name is "Richard Dawkins"
-              session.query(Book).filter(Book.author_id == Author.author_id).filter(Author.name == "Richard Dawkins").all()
-              session.query(Book).join(Author).filter(Author.name == "Richard Dawkins").all()
-              session.query(Book).\
-                  from_statement("SELECT b.* FROM books b, authors a WHERE b.author_id = a.author_id AND a.name=:name").\
-                      params(name="Richard Dawkins").all()
-              session.query(Book).filter(Book.author == author_1).all()
-            
-          
-
- -
-

Some nice features

-
-            
-              import pandas as pd
-
-              from sqlalchemy import func
-
-              class Book(Base):
-                  # ...
-                  author = relationship(
-                      Author, backref=backref("books", lazy="dynamic", order_by=title)
-                  )
-                  # ...
-
-                  @hybrid_property
-                  def newly_arrived(self):
-                      return self.book_id > 2
-
-                  @newly_arrived.expression
-                  def newly_arrived(cls):
-                      return cls.book_id > 2
-                      # return func.abs(cls.book_id) > 2
-
-              # .books is now a Query object
-              query = author_obj.books.filter(Book.title.ilike("%red%"))
-
-              session.query(Book).filter(Book.newly_arrived.is_(True)).all()
-              # Out: [<__main__.Book at 0x7f132bdf0130>]
-              # WHERE (abs(books.book_id) > ?) IS 1  ... in the case of func.abs
-
-              # with Pandas
-              df = pd.read_sql_table("my_table", con=session.get_bind())  # or con=engine
-
-              df = pd.read_sql_query(query.statement, engine)
-
-            
-          
-
- -
-

Q & A

-
- -
-
- - - - - - - - - - + + +
+

Basic architecture

+

SQLAlchemy consists of several components, including the ORM.

+ + +
+ +
+

Example

+

SQLAlchemy gives us the choice between classical mapping and the newer declarative mapping

+
+                        
+                            # option 1: classical mapping
+                            # explicitly defining Table objects and mapping them to pure Python base classes
+                            from sqlalchemy import create_engine
+
+                            # engine = create_engine("postgresql+psycopg2://user:zipassword@localhost/mydb" , echo=True)
+                            # The string form of the URL is dialect+driver://user:password@host/dbname[?key=value..],
+                            # engine = create_engine("sqlite:///library.db", echo=True)
+                            engine = create_engine("sqlite:///:memory:", echo=True)
+
+                            from sqlalchemy import Column, MetaData, Table
+                            from sqlalchemy import DateTime, ForeignKey, Integer, Numeric, String
+
+                            metadata = MetaData()
+
+                            production_types_table = Table(
+                                "production_types",
+                                metadata,
+                                Column("production_type_id", Integer, primary_key=True),
+                                Column("code", String(3), nullable=False, unique=True),
+                                Column("description", String),  # Column("name", String(128)) is possible
+                            )
+
+                            bidding_areas_table = Table(
+                                "bidding_areas",
+                                metadata,
+                                Column("bidding_area_id", Integer, primary_key=True),
+                                Column("code", String(3), nullable=False, unique=True),
+                                Column("name", String(32)),
+                            )
+
+                            production_plans_table = Table(
+                                "production_plans",
+                                metadata,
+                                Column("record_created_time", DateTime(timezone=False), primary_key=True),
+                                Column("start_time", DateTime(timezone=False), primary_key=True),
+                                Column("bidding_area_id", Integer, ForeignKey("bidding_areas.bidding_area_id"), primary_key=True),
+                                Column("production_type_id", Integer, ForeignKey("production_types.production_type_id"), primary_key=True),
+                                Column("value", Numeric, nullable=False),
+                            )
+
+                            metadata.create_all(engine)  # creates the tables
+                        
+                    
+
+ +
+

Example (cont...)

+

Use of SQL expression language

+
+                        
+                            # option 1: classical mapping (continues)
+                            # Using the SQL expression language (low level interface)
+                            from sqlalchemy import text
+
+                            insert_stmt = bidding_areas_table.insert(bind=engine)
+                            type(insert_stmt)
+                            # Out: <class 'sqlalchemy.sql.dml.Insert'>
+                            print(insert_stmt)
+                            # Out: INSERT INTO bidding_areas (bidding_area_id, code, name) VALUES (?, ?, ?)
+
+                            compiled_stmt = insert_stmt.compile()
+                            print(compiled_stmt.params)
+                            # Out: {'bidding_area_id': None, 'code': None, 'name': None}
+
+                            insert_stmt.execute(bidding_area_id=1, code="NO1", name="Elspot NO1")  # insert a single entry
+                            # ... or a list of entries
+                            insert_stmt.execute(
+                                [
+                                    {"bidding_area_id": 2, "code": "NO2", "name": "Elspot NO2"},
+                                    {"bidding_area_id": 3, "code": "NO3", "name": "Elspot NO3"},
+                                    {"bidding_area_id": 4, "code": "NO4", "name": "Elspot NO4"},
+                                    {"bidding_area_id": 5, "code": "NO5", "name": "Elspot NO5"},
+                                    {"bidding_area_id": 6, "code": "NO6", "name": "Elspot NO6"},
+                                ]
+                            )
+
+                            metadata.bind = engine  # no need to explicitly bind the engine from now on
+                            select_stmt = bidding_areas_table.select(bidding_areas_table.c.bidding_area_id==2)
+                            result = select_stmt.execute()
+                            result.fetchall()
+                            # Out: [(2, 'NO2', 'Elspot NO2')]
+
+                            del_stmt = bidding_areas_table.delete()
+                            del_stmt.execute(whereclause=text("name='Elspot NO6'"))
+                            del_stmt.execute()  # delete NO6
+                        
+                    
+
+ +
+

Example (cont...)

+

Use of classical mapping

+
+                        
+                            # option 1: classical mapping (continues)
+                            # Defining regular base classes and mapping them to the Table objects
+                            from sqlalchemy.orm import mapper
+
+                            class ProductionType:
+                                def __init__(self, code, description):
+                                    self.code = code
+                                    self.description = description
+
+                                def __str__(self):
+                                    return self.code
+
+
+                            class BiddingArea:
+                                def __init__(self, code, name):
+                                    self.code = code
+                                    self.name = name
+
+                                def __str__(self):
+                                    return self.code
+
+                            mapper(ProductionType, production_types_table)
+                            mapper(BiddingArea, bidding_areas_table)
+                        
+                    
+
+ +
+

Example (cont...)

+

Use of classical mapping

+
+                        
+                            from sqlalchemy.orm import relationship
+
+                            class ProductionPlan:
+                                def __init__(self, record_created_time, start_time, production_type, bidding_area, value):
+                                    self.record_created_time = record_created_time
+                                    self.start_time = start_time
+                                    self.production_type = production_type
+                                    self.bidding_area = bidding_area
+                                    self.value = value
+
+                                def __str__(self):
+                                    return (
+                                        f"{self.record_created_time} {self.start_time} "
+                                        f"{self.production_type} {self.bidding_area} {self.value}"
+                                    )
+
+
+                            mapper(
+                                ProductionPlan,
+                                production_plans_table,
+                                properties = {
+                                    "production_type": relationship(ProductionType, backref="production_plans"),
+                                    "bidding_area": relationship(BiddingArea, backref="production_plans"),
+                                },
+                            )
+                        
+                    
+
+ +
+

Example (cont...)

+

Doing the same thing the easy way with declarative mapping

+
+                        
+                            # option 2: declarative mapping
+                            from sqlalchemy.ext.declarative import declarative_base
+
+                            Base = declarative_base()
+
+                            class ProductionType(Base):
+                                __tablename__ = "production_types"
+
+                                production_type_id = Column(Integer, primary_key=True)
+                                code = Column(String(3), nullable=False, unique=True)
+                                description = Column(String)
+
+                                def __init__(self, code, description):
+                                    self.code = code
+                                    self.description = description
+
+                                def __str__(self):
+                                    return self.code
+
+                            class BiddingArea(Base):
+                                __tablename__ = "bidding_areas"
+
+                                bidding_area_id = Column(Integer, primary_key=True)
+                                code = Column(String(3), nullable=False, unique=True)
+                                name = Column(String(32))
+
+                                def __init__(self, code, name):
+                                    self.code = code
+                                    self.name = name
+
+                                def __str__(self):
+                                    return self.code
+                        
+                    
+
+ +
+

Example (cont...)

+

Doing the same thing the easy way with declarative mapping

+
+                        
+                            # option 2: declarative mapping (continues)
+                            from sqlalchemy.orm import relationship, backref
+
+                            class ProductionPlan(Base):
+                                __tablename__ = "production_plans"
+
+                                record_created_time = Column(DateTime(timezone=False), primary_key=True)
+                                start_time = Column(DateTime(timezone=False), primary_key=True)
+                                bidding_area_id = Column(Integer, ForeignKey("bidding_areas.bidding_area_id"), primary_key=True)
+                                production_type_id = Column(Integer, ForeignKey("production_types.production_type_id"), primary_key=True)
+                                value = Column(Numeric, nullable=False)
+
+                                # defining relationships.
+                                # the defined attributes will reference 'ProductionType' and 'BiddingArea' objects
+                                production_type = relationship(ProductionType, backref=backref("production_plans"))
+                                bidding_area = relationship(BiddingArea, backref=backref("production_plans"))
+
+                                def __init__(self, record_created_time, start_time, production_type, bidding_area, value):
+                                    self.record_created_time = record_created_time
+                                    self.start_time = start_time
+                                    self.production_type = production_type  # a 'ProductionType' object
+                                    self.bidding_area = bidding_area  # a 'BiddingArea' object
+                                    self.value = value
+
+                                def __str__(self):
+                                    return (
+                                        f"{self.record_created_time} {self.start_time} "
+                                        f"{self.production_type} {self.bidding_area} {self.value}"
+                                    )
+
+                            Base.metadata.create_all(engine)  # create tables
+                        
+                    
+
+ +
+

Example (cont...)

+

Creating instances

+
+                        
+                            # adding some data...
+                            import datetime
+                            import decimal
+
+                            from sqlalchemy.orm import sessionmaker
+
+                            Session = sessionmaker(bind=engine)  # bound session
+                            session = Session()
+
+                            bidding_area1 = BiddingArea("NO1", "Elspot NO1")
+                            session.add(bidding_area1)
+
+                            session.add_all(
+                                [
+                                    BiddingArea("NO2", "Elspot NO2"),
+                                    BiddingArea("NO3", "Elspot NO3"),
+                                    BiddingArea("NO4", "Elspot NO4"),
+                                    BiddingArea("NO5", "Elspot NO5"),
+                                ]
+                            )
+
+                            production_type_B37 = ProductionType("B37", "Thermal unspecified")
+                            production_type_B30 = ProductionType("B30", "Wind unspecified")
+
+                            session.add_all(
+                                [
+                                    ProductionType("B19", "Wind Onshore"),
+                                    ProductionType("B10", "Hydro-electric pure pumped storage head installation"),
+                                    ProductionType("B11", "Hydro Run-of-river head installation"),
+                                    ProductionType("B12", "Hydro-electric storage head installation"),
+                                    ProductionType("A04", "Generation"),
+                                    production_type_B37,
+                                    production_type_B30,
+                                ]
+                            )
+                        
+                    
+
+ +
+

Example (cont...)

+

Creating instances

+
+                        
+                            # adding some production plans...
+
+                            session.add(
+                                ProductionPlan(
+                                    datetime.datetime.now(),
+                                    datetime.datetime(2022, 11, 2, 1, 0),
+                                    production_type_B37,
+                                    bidding_area1,
+                                    decimal.Decimal("80.5"),
+                                )
+                            )
+
+                            production_plan2 = ProductionPlan(
+                                datetime.datetime.now(),
+                                datetime.datetime(2022, 11, 2, 2, 0),
+                                production_type_B37,
+                                bidding_area1,
+                                decimal.Decimal("90.5"),
+                            )
+
+                            session.add(production_plan2)
+
+                            session.flush()  # execute pending operations
+                            session.commit()  # execute and commit pending operations
+
+                            production_plan2.value = decimal.Decimal("70.5")
+                            production_plan2 in session
+                            # Out: True
+
+                            session.commit()
+                        
+                    
+
+ +
+

Example (cont...)

+

Queries

+
+                        
+                            import pandas as pd
+
+                            session.query(ProductionPlan).order_by(ProductionPlan.start_time)  # returns a Query instance
+                            session.query(ProductionPlan).order_by(ProductionPlan.start_time).all()  # returns an object-list
+
+                            # return all production plans where start_time after 2022-09-01 00:00
+                            session.query(ProductionPlan).filter(ProductionPlan.start_time > datetime.datetime(2022, 9, 1, 0, 0)).all()
+
+                            # return production plans with value > 80
+                            query = session.query(ProductionPlan).filter(ProductionPlan.value > 80).order_by(ProductionPlan.start_time)
+                            query.count()  # returns 1
+                            production_plan = query.first()  # returns the first object (element)
+                            production_plan = query.one()  # raises NoResultFound exception or MultipleResultsFound in case elements != 1
+
+                            # generate Pandas DataFrame from a query or entire table
+                            df = pd.read_sql_table("my_table", con=session.get_bind())  # or con=engine
+                            df = pd.read_sql_query(query.statement, engine)
+
+                            # return production plans with production type 'B37'
+                            session.query(ProductionPlan).filter(
+                                ProductionPlan.production_type_id == ProductionType.production_type_id
+                            ).filter(ProductionType.code == "B37").all()
+                            session.query(ProductionPlan).join(ProductionType).filter(ProductionType.code == "B37").all()
+                            session.query(ProductionPlan).filter(ProductionPlan.production_type == production_type_B37).all()
+                            session.query(
+                                ProductionPlan
+                            ).from_statement(
+                                text(
+                                    "SELECT pp.* FROM production_plans pp, production_types pt "
+                                    "WHERE pp.production_type_id = pt.production_type_id AND pt.code=:code"
+                                )
+                            ).params(code="B37").all()
+                        
+                    
+
+ +
+

Q & A

+
+ + + + + + + + + + + + + -- cgit v1.3